whole-genome microarray Search Results


mouse oligo microarray phalanx mouse whole genome one arraytm  (Phalanx Biotech)
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Mouse Oligo Microarray Phalanx Mouse Whole Genome One Arraytm, supplied by Phalanx Biotech, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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comparative genomic hybridization on microarrays  (WholeGenome LLC)
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WholeGenome LLC comparative genomic hybridization on microarrays
Comparative Genomic Hybridization On Microarrays, supplied by WholeGenome LLC, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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affymetrix hg-133 plus 2.0 whole genome microarrays  (LC Sciences)
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LC Sciences affymetrix hg-133 plus 2.0 whole genome microarrays
Affymetrix Hg 133 Plus 2.0 Whole Genome Microarrays, supplied by LC Sciences, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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microarray whole human genome oligo microarray  (Arraystar inc)
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Arraystar inc microarray whole human genome oligo microarray
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agilent whole-rat genome oligonucleotide microarrays  (Cogenics Inc)
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Cogenics Inc agilent whole-rat genome oligonucleotide microarrays
Agilent Whole Rat Genome Oligonucleotide Microarrays, supplied by Cogenics Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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90 k whole genome microarray  (CombiMatrix)
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CombiMatrix 90 k whole genome microarray
Validation of gene expression patterns of Physcomitrella patens . Selected expression profiles were validated with quantitative real-time polymerase chain reaction (qPCR). Two genes encode transcription factors (AP2/EREBP, APETALA2/ethylene-responsive element binding protein: Pp1s373_18V6.1, PpABI3b ; abscisic acid insensitive 3: Pp1s173_143V6.1). Further genes encode a sucrose synthase (Pp1s93_98V6.1), an S -adenosylmethionine decarboxylase (SAMDC, Pp1s335_22V6.1), a putative polyunsaturated fatty acid desaturase (PUFA desaturase, Pp1s286_53V6.1), a glutathione peroxidase (GPX, PpGPX1 : Pp1s98_2V6.1) and a calcium-dependent protein kinase (CDPK, Pp1s309_91V6.1). A late embryogenesis abundant (LEA)-like protein-coding gene (Pp1s267_21V6.1) and the dehydrin-coding gene PpCOR47 (cold-responsive, Pp1s442_22V6.2) were late induced. Gray bars, mean fold changes of expression obtained from qPCR for at least three biological replicates. Error bars represent the standard error of the mean. Black lines, means of expression fold changes from <t>microarray</t> analyses. Asterisks show significant induction (black, microarray; gray, qPCR): *, P < 0.05.
90 K Whole Genome Microarray, supplied by CombiMatrix, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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whole-genome 0.5 mb ‘cytochip' microarrays  (BlueGnome Limited)
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BlueGnome Limited whole-genome 0.5 mb ‘cytochip' microarrays
Validation of gene expression patterns of Physcomitrella patens . Selected expression profiles were validated with quantitative real-time polymerase chain reaction (qPCR). Two genes encode transcription factors (AP2/EREBP, APETALA2/ethylene-responsive element binding protein: Pp1s373_18V6.1, PpABI3b ; abscisic acid insensitive 3: Pp1s173_143V6.1). Further genes encode a sucrose synthase (Pp1s93_98V6.1), an S -adenosylmethionine decarboxylase (SAMDC, Pp1s335_22V6.1), a putative polyunsaturated fatty acid desaturase (PUFA desaturase, Pp1s286_53V6.1), a glutathione peroxidase (GPX, PpGPX1 : Pp1s98_2V6.1) and a calcium-dependent protein kinase (CDPK, Pp1s309_91V6.1). A late embryogenesis abundant (LEA)-like protein-coding gene (Pp1s267_21V6.1) and the dehydrin-coding gene PpCOR47 (cold-responsive, Pp1s442_22V6.2) were late induced. Gray bars, mean fold changes of expression obtained from qPCR for at least three biological replicates. Error bars represent the standard error of the mean. Black lines, means of expression fold changes from <t>microarray</t> analyses. Asterisks show significant induction (black, microarray; gray, qPCR): *, P < 0.05.
Whole Genome 0.5 Mb ‘Cytochip' Microarrays, supplied by BlueGnome Limited, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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whole human genome oligo microarray 4x44k  (SuperArray Bioscience Corporation)
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SuperArray Bioscience Corporation whole human genome oligo microarray 4x44k
Validation of gene expression patterns of Physcomitrella patens . Selected expression profiles were validated with quantitative real-time polymerase chain reaction (qPCR). Two genes encode transcription factors (AP2/EREBP, APETALA2/ethylene-responsive element binding protein: Pp1s373_18V6.1, PpABI3b ; abscisic acid insensitive 3: Pp1s173_143V6.1). Further genes encode a sucrose synthase (Pp1s93_98V6.1), an S -adenosylmethionine decarboxylase (SAMDC, Pp1s335_22V6.1), a putative polyunsaturated fatty acid desaturase (PUFA desaturase, Pp1s286_53V6.1), a glutathione peroxidase (GPX, PpGPX1 : Pp1s98_2V6.1) and a calcium-dependent protein kinase (CDPK, Pp1s309_91V6.1). A late embryogenesis abundant (LEA)-like protein-coding gene (Pp1s267_21V6.1) and the dehydrin-coding gene PpCOR47 (cold-responsive, Pp1s442_22V6.2) were late induced. Gray bars, mean fold changes of expression obtained from qPCR for at least three biological replicates. Error bars represent the standard error of the mean. Black lines, means of expression fold changes from <t>microarray</t> analyses. Asterisks show significant induction (black, microarray; gray, qPCR): *, P < 0.05.
Whole Human Genome Oligo Microarray 4x44k, supplied by SuperArray Bioscience Corporation, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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180k-feature whole-genome microarray cytosure iscav2  (Oxford Gene Technology)
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Oxford Gene Technology 180k-feature whole-genome microarray cytosure iscav2
Validation of gene expression patterns of Physcomitrella patens . Selected expression profiles were validated with quantitative real-time polymerase chain reaction (qPCR). Two genes encode transcription factors (AP2/EREBP, APETALA2/ethylene-responsive element binding protein: Pp1s373_18V6.1, PpABI3b ; abscisic acid insensitive 3: Pp1s173_143V6.1). Further genes encode a sucrose synthase (Pp1s93_98V6.1), an S -adenosylmethionine decarboxylase (SAMDC, Pp1s335_22V6.1), a putative polyunsaturated fatty acid desaturase (PUFA desaturase, Pp1s286_53V6.1), a glutathione peroxidase (GPX, PpGPX1 : Pp1s98_2V6.1) and a calcium-dependent protein kinase (CDPK, Pp1s309_91V6.1). A late embryogenesis abundant (LEA)-like protein-coding gene (Pp1s267_21V6.1) and the dehydrin-coding gene PpCOR47 (cold-responsive, Pp1s442_22V6.2) were late induced. Gray bars, mean fold changes of expression obtained from qPCR for at least three biological replicates. Error bars represent the standard error of the mean. Black lines, means of expression fold changes from <t>microarray</t> analyses. Asterisks show significant induction (black, microarray; gray, qPCR): *, P < 0.05.
180k Feature Whole Genome Microarray Cytosure Iscav2, supplied by Oxford Gene Technology, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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whole-genome oligonucleotide microarray cytosure constitutional v3 (8 × 60 k)  (Oxford Gene Technology)
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Oxford Gene Technology whole-genome oligonucleotide microarray cytosure constitutional v3 (8 × 60 k)
Validation of gene expression patterns of Physcomitrella patens . Selected expression profiles were validated with quantitative real-time polymerase chain reaction (qPCR). Two genes encode transcription factors (AP2/EREBP, APETALA2/ethylene-responsive element binding protein: Pp1s373_18V6.1, PpABI3b ; abscisic acid insensitive 3: Pp1s173_143V6.1). Further genes encode a sucrose synthase (Pp1s93_98V6.1), an S -adenosylmethionine decarboxylase (SAMDC, Pp1s335_22V6.1), a putative polyunsaturated fatty acid desaturase (PUFA desaturase, Pp1s286_53V6.1), a glutathione peroxidase (GPX, PpGPX1 : Pp1s98_2V6.1) and a calcium-dependent protein kinase (CDPK, Pp1s309_91V6.1). A late embryogenesis abundant (LEA)-like protein-coding gene (Pp1s267_21V6.1) and the dehydrin-coding gene PpCOR47 (cold-responsive, Pp1s442_22V6.2) were late induced. Gray bars, mean fold changes of expression obtained from qPCR for at least three biological replicates. Error bars represent the standard error of the mean. Black lines, means of expression fold changes from <t>microarray</t> analyses. Asterisks show significant induction (black, microarray; gray, qPCR): *, P < 0.05.
Whole Genome Oligonucleotide Microarray Cytosure Constitutional V3 (8 × 60 K), supplied by Oxford Gene Technology, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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whole-genome asd-dedicated microarray cytosure 4 × 180 k  (Oxford Gene Technology)
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Oxford Gene Technology whole-genome asd-dedicated microarray cytosure 4 × 180 k
Validation of gene expression patterns of Physcomitrella patens . Selected expression profiles were validated with quantitative real-time polymerase chain reaction (qPCR). Two genes encode transcription factors (AP2/EREBP, APETALA2/ethylene-responsive element binding protein: Pp1s373_18V6.1, PpABI3b ; abscisic acid insensitive 3: Pp1s173_143V6.1). Further genes encode a sucrose synthase (Pp1s93_98V6.1), an S -adenosylmethionine decarboxylase (SAMDC, Pp1s335_22V6.1), a putative polyunsaturated fatty acid desaturase (PUFA desaturase, Pp1s286_53V6.1), a glutathione peroxidase (GPX, PpGPX1 : Pp1s98_2V6.1) and a calcium-dependent protein kinase (CDPK, Pp1s309_91V6.1). A late embryogenesis abundant (LEA)-like protein-coding gene (Pp1s267_21V6.1) and the dehydrin-coding gene PpCOR47 (cold-responsive, Pp1s442_22V6.2) were late induced. Gray bars, mean fold changes of expression obtained from qPCR for at least three biological replicates. Error bars represent the standard error of the mean. Black lines, means of expression fold changes from <t>microarray</t> analyses. Asterisks show significant induction (black, microarray; gray, qPCR): *, P < 0.05.
Whole Genome Asd Dedicated Microarray Cytosure 4 × 180 K, supplied by Oxford Gene Technology, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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whole-genome microarray experiments  (Galbraith Laboratories Inc)
90
Galbraith Laboratories Inc whole-genome microarray experiments
Validation of gene expression patterns of Physcomitrella patens . Selected expression profiles were validated with quantitative real-time polymerase chain reaction (qPCR). Two genes encode transcription factors (AP2/EREBP, APETALA2/ethylene-responsive element binding protein: Pp1s373_18V6.1, PpABI3b ; abscisic acid insensitive 3: Pp1s173_143V6.1). Further genes encode a sucrose synthase (Pp1s93_98V6.1), an S -adenosylmethionine decarboxylase (SAMDC, Pp1s335_22V6.1), a putative polyunsaturated fatty acid desaturase (PUFA desaturase, Pp1s286_53V6.1), a glutathione peroxidase (GPX, PpGPX1 : Pp1s98_2V6.1) and a calcium-dependent protein kinase (CDPK, Pp1s309_91V6.1). A late embryogenesis abundant (LEA)-like protein-coding gene (Pp1s267_21V6.1) and the dehydrin-coding gene PpCOR47 (cold-responsive, Pp1s442_22V6.2) were late induced. Gray bars, mean fold changes of expression obtained from qPCR for at least three biological replicates. Error bars represent the standard error of the mean. Black lines, means of expression fold changes from <t>microarray</t> analyses. Asterisks show significant induction (black, microarray; gray, qPCR): *, P < 0.05.
Whole Genome Microarray Experiments, supplied by Galbraith Laboratories Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Image Search Results


Validation of gene expression patterns of Physcomitrella patens . Selected expression profiles were validated with quantitative real-time polymerase chain reaction (qPCR). Two genes encode transcription factors (AP2/EREBP, APETALA2/ethylene-responsive element binding protein: Pp1s373_18V6.1, PpABI3b ; abscisic acid insensitive 3: Pp1s173_143V6.1). Further genes encode a sucrose synthase (Pp1s93_98V6.1), an S -adenosylmethionine decarboxylase (SAMDC, Pp1s335_22V6.1), a putative polyunsaturated fatty acid desaturase (PUFA desaturase, Pp1s286_53V6.1), a glutathione peroxidase (GPX, PpGPX1 : Pp1s98_2V6.1) and a calcium-dependent protein kinase (CDPK, Pp1s309_91V6.1). A late embryogenesis abundant (LEA)-like protein-coding gene (Pp1s267_21V6.1) and the dehydrin-coding gene PpCOR47 (cold-responsive, Pp1s442_22V6.2) were late induced. Gray bars, mean fold changes of expression obtained from qPCR for at least three biological replicates. Error bars represent the standard error of the mean. Black lines, means of expression fold changes from microarray analyses. Asterisks show significant induction (black, microarray; gray, qPCR): *, P < 0.05.

Journal: The New Phytologist

Article Title: Insights from the cold transcriptome of Physcomitrella patens : global specialization pattern of conserved transcriptional regulators and identification of orphan genes involved in cold acclimation

doi: 10.1111/nph.13004

Figure Lengend Snippet: Validation of gene expression patterns of Physcomitrella patens . Selected expression profiles were validated with quantitative real-time polymerase chain reaction (qPCR). Two genes encode transcription factors (AP2/EREBP, APETALA2/ethylene-responsive element binding protein: Pp1s373_18V6.1, PpABI3b ; abscisic acid insensitive 3: Pp1s173_143V6.1). Further genes encode a sucrose synthase (Pp1s93_98V6.1), an S -adenosylmethionine decarboxylase (SAMDC, Pp1s335_22V6.1), a putative polyunsaturated fatty acid desaturase (PUFA desaturase, Pp1s286_53V6.1), a glutathione peroxidase (GPX, PpGPX1 : Pp1s98_2V6.1) and a calcium-dependent protein kinase (CDPK, Pp1s309_91V6.1). A late embryogenesis abundant (LEA)-like protein-coding gene (Pp1s267_21V6.1) and the dehydrin-coding gene PpCOR47 (cold-responsive, Pp1s442_22V6.2) were late induced. Gray bars, mean fold changes of expression obtained from qPCR for at least three biological replicates. Error bars represent the standard error of the mean. Black lines, means of expression fold changes from microarray analyses. Asterisks show significant induction (black, microarray; gray, qPCR): *, P < 0.05.

Article Snippet: The microarray experiments were performed with a 90 K whole genome microarray (Combimatrix Corp., Mukilteo, WA, USA) and a probe design as described previously (Wolf et al ., ).

Techniques: Biomarker Discovery, Gene Expression, Expressing, Real-time Polymerase Chain Reaction, Binding Assay, Microarray